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April 6, 2020 at 9:17 am #29041Carlos QuilesKeymaster
Updated version 1.90.4 with new mtDNA reported in Evaluation of DNA conservation in Nile-Saharan environment, Missiminia, in Nubia: Tracking maternal lineage of “X-Group”, by Yahia Mehdi Seddik Cherifi, Selma Amrani.April 9, 2020 at 6:53 pm #29159Carlos QuilesKeymaster
Updated version 1.90.5, including corrections to I1 subclades (in my file) posted on YFull Facebook Group by Simon Hedley.
Included two mtDNA reported by Rogers et al. from WSU Human Biology Open Access preprints at https://digitalcommons.wayne.edu/humbiol_preprints/160April 9, 2020 at 8:21 pm #29160Carlos QuilesKeymaster
Version 1.90.6, updated with reports from Simon Hedley’s great Haplogroup I1 Ancient DNA Samples Google Map.
He includes very detailed BAM analyses of ancient I1 samples reported to date.April 17, 2020 at 10:53 am #29327Carlos QuilesKeymaster
Version 1.90.8 includes minor updates and mtDNA from the study Mitochondrial genomes from Bronze Age Poland reveal genetic continuity from the Late Neolithic and additional genetic affinities with the steppe populations, by Juras et al. J. Phys. Anthropol. (2020)April 22, 2020 at 10:53 am #29599Carlos QuilesKeymasterMay 8, 2020 at 10:38 am #29795Carlos QuilesKeymasterMay 21, 2020 at 12:50 pm #29856Carlos QuilesKeymaster
Updated from version 1.91.9 to version 1.91.12, including the new Baikal samples from Yu et al. Cell (2020) and the Maros samples from Zegarac et al. bioRxiv (2020), as well as the few reported Trentino samples in Graeffen’s thesis (2020), the few mtDNA from East Asian genomes, or the few Inner Mongolia samples from Li et al. Phys. Anthr. (2020), which updates their previous Li et al. (2017) report.June 10, 2020 at 12:32 pm #30280Carlos QuilesKeymaster
Update to version 1.93 with automated SNP calls from genotypes shared by Kolgeh (as suggested in comments).June 17, 2020 at 12:23 pm #30352Carlos QuilesKeymaster
Version 2.0x includes new columns for:
- FTDNA haplotree
- YFull mtree
- Responsible for mtDNA SNP calls and the SNP calls published by them.
- Lactase Persistence – now separated from “other”, more focused on diseases.
The most interesting part is the correction of nomenclature and hyperlinks, so that the file may be accurately used for mtDNA phylogeography.
Newly reported samples – or recently found by me – have also been added.
The new standard versions don’t have fields specific for GIS maps.
Announcement is here.June 19, 2020 at 9:49 am #30358Carlos QuilesKeymaster
Updated to version 2.01.7 with data from the new Cassidy et al. (2020) mostly updating data from her 2017 thesis.
Also added skin – hair – eye color data thanks to their assessments, even though they are limited to early available (and more ‘western’) samples.
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